The mysterious pyramid of light had brought the world of Yu-Gi-Oh! together, and had given birth to a new generation of duelists. As Yugi and his friends looked up at the pyramid, now a symbol of their incredible adventure, they knew that they would always cherish the memories of their epic quest.
Meskipun kartu Pyramid of Light dilarang di turnamen resmi karena terlalu overpower, film ini memperkenalkan mekanik "penghapusan monster tanpa mengirim ke graveyard" yang kemudian diadopsi dalam bentuk Banished Zone (area pengasingan).
Pertarungan pun tak terhindarkan: Yugi (dengan roh Atem) vs. Kaiba vs. Anubis. Siapa yang akan menang? Akankah Pyramid of Light menghancurkan dunia para duelist?
